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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015843838.1_cds_XP_016508834.1_21815
CDS Infomation

[gene=LOC107826384] [db_xref=GeneID:107826384] [protein=pre-mRNA-processing protein 40C-like] [protein_id=XP_016508834.1] [location=complement(join(795..908,1273..1452,3123..3206,16090..16560,19183..19261,21144..21181,22121..22284,22380..23019,23162..23191))] [gbkey=CDS]
Sequence

ATGGTGCAGACTGATCAAACAATGAAACCACTGCAGAATAGAAGAGTTGACATTGCACAC
GAAATGGGAGCAATGACTTTTCCACCTTCTTTCATGCAGTCTTTTTCACAGGCTGGTCAC
ATGAGTTCTGGTTCTTCGACGGCTGCATTTCCAACTTCTCATTTGGGCTCTCCAAATATA
AGAATGCCCCACGCACCTCAATTTCAGGTTCCAGCTGGAGTGCCTAGGAGTCCTGTTACA
CCTGGTCCTCCTGGTCTTGGTCCAGTTATACCTTCATCTTCCAACATGACTGCTACAGCT
TCACCTGGAGGTCCTTCTTTATCCTTAAGGCCCAATGGGCCTCCTGTTCCTGTTCTGGCC
AATCCACCTGTTCAGCAACAAATATACTCTCCCTATCTTTCTGCCTCTCCTATGGCTCCA
ACTCTCCAGGGACCTTGGTTGCAGCCTTCACCTGTCACTACCATGCTAAGACCACCATTT
CCATCACACCCCGCAGGTTTTGCTGTTCCCTTTCCTTTGTCAGCTACTGGTGCACCACTT
TCTTCAGCGACATTGCCCGACACTCGACCTCCTGGTGTCGCCTCCGTGGCAACTCCACCT
GGAGTGCCGACTACTGCTACCCAGTCAATCCCTGCTTTAGGGTTGCAGCCAGAATTACCT
CCTGGAGTTGACAGCGCTAAGCATGCAAATGATGCTGACACTAAAGAAGGAGCTCCAACC
AGTGAACAACTGGAGGCCTGGACTGCTCACCGGACTGAAACAGGAGCCATATACTACTAT
AATTCTTTGACTGGAGAATCTACTTATGAGAAACCTGCTGGCTTTAGCGGAGAGCCGGCC
AAAGTCGCTGCGCAGCCAACTCCCGTTTCATGGGAAAAGTTGGCTGGTACAGATTGGGCA
TTGGTTACTACCAATGATGGACAAAAATACTACTATAACACTAAAACAAAGTTAAGCAGC
TGGCAAATTCCTAATGACGTGACAGAGTTGAAAAAGAAGCATGATGCTGATGCTTTGCAG
GCTCAATCAATGTCAATGCCTAATGCTAATGCATTAACTGAAAAAGGATCTTCTCCTATT
AGTTTGAGCATTCCTGCTGTTAATACAGGTGGTCGTGATGCAACAACTCTAAGATCTTCA
GTTGTTCCAGGATCTTCTGCACTGGATCTTGTAAAAAAGAAGTTAATGGATGCTGGTGCT
ACGACTGCTGTTTCTTCACCAGCCCCAGCCTCTTCAGGAGTAATATCATCTGAGCTAAAT
GGATCAGAAGCACTTGAATCTACAGTCAGAGCTCCACAAAAAGAAAATAGCAAAGAGAAG
TCAAAAGAAGCTAATGACAATGGCAATATGTCTGAGTCCTCTTCCGATTCAGAAGATGAT
GAGAGTGTACCAACCAAAGAGGACTGTATCATCCAATTCAAGGAGATGCTGAAGGAACGT
GGAGTAGCACCATTCTCAAAGTGGGAGAAGGAATTACCGAAGATAGTGTTTGATCCACGC
TTTAAGGCTATTCCAAGTTACAGTGCTAGAAAAGCTCTGTTTGAGCATTATGTCAAGACA
CGTGCGGACGAAGAAAGGAAGGAGAAACGGGCAGCACAGAAAGCTGCAGTGGAGGGCTTC
AAGCATTTACTGGAAGAAGCAAAGGAGGTTTATCTTGTTACTAAGCGCTCTTTAGTTCTT
TCAGATGATATCAACGAGGACACTGATTATCAATCATTCAAAAAGAAATGGGGTCATGAT
CGACGCTTTGAGTCCTTAGATCGAAAGGATAGAGAAGTGCTGCTGAATGAGAGGTATTAG

Peptide Sequence

PEP ID

XP_016508834.1
PEP Infomation

PREDICTED: pre-mRNA-processing protein 40C-like [Nicotiana tabacum]
Sequence

MVQTDQTMKPLQNRRVDIAHEMGAMTFPPSFMQSFSQAGHMSSGSSTAAFPTSHLGSPNI
RMPHAPQFQVPAGVPRSPVTPGPPGLGPVIPSSSNMTATASPGGPSLSLRPNGPPVPVLA
NPPVQQQIYSPYLSASPMAPTLQGPWLQPSPVTTMLRPPFPSHPAGFAVPFPLSATGAPL
SSATLPDTRPPGVASVATPPGVPTTATQSIPALGLQPELPPGVDSAKHANDADTKEGAPT
SEQLEAWTAHRTETGAIYYYNSLTGESTYEKPAGFSGEPAKVAAQPTPVSWEKLAGTDWA
LVTTNDGQKYYYNTKTKLSSWQIPNDVTELKKKHDADALQAQSMSMPNANALTEKGSSPI
SLSIPAVNTGGRDATTLRSSVVPGSSALDLVKKKLMDAGATTAVSSPAPASSGVISSELN
GSEALESTVRAPQKENSKEKSKEANDNGNMSESSSDSEDDESVPTKEDCIIQFKEMLKER
GVAPFSKWEKELPKIVFDPRFKAIPSYSARKALFEHYVKTRADEERKEKRAAQKAAVEGF
KHLLEEAKEVYLVTKRSLVLSDDINEDTDYQSFKKKWGHDRRFESLDRKDREVLLNERY

Transcript Sequence

Gene sequence data has not been registered.